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LAMMPS and GROMACS
Large-scale Atomic Molecular Massively Parallel Simulator.
LAMMPS is a classical molecular dynamics simulation software that is useful for materials modelling. LAMMPS can complement neutron scattering experiments by helping visualise complex structures and interactions between atoms.
![nano confined water](/sites/default/files/styles/wysiwyg_image/public/2022-06/nanoconfinedwater.png?itok=CXtGdTMU)
Image from lammpstutorials.github.io
Groningen Machine for Chemical Simulations
GROMACS is a molecular dynamics package that simulates proteins, lipids, and nucleic acids. It can be used in conjunction with experiments to estimate binding energies between complex molecules and explore different thermodynamic configurations.
![gromacs aanalysis](/sites/default/files/styles/wysiwyg_image/public/2022-06/Figure2_small.png?itok=c3l2IyE_)
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